Modeling and Simulation of Biochemical Nerworks

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Created on Thursday 25 July 2002 by Shlomo Ta'asan

Table of Contents
  1. Multiscale Modeling and Simulation of Large Biochemical Networks
  2. Slide 3
  3. Slide 4
  4. Slide 5
  5. Issues
  6. The difficulty is not to put it all in one big model
  7. Modeling Tools
  8. Focus on ODE
  9. Dynamics
  10. Multiple time scales
  11. Predictable Features
  12. Slide 13
  13. Statistical Analysis
  14. counting #points in each box
  15. Transition Probabilities
  16. The math
  17. Implementation
  18. An Example
  19. Slow Reaction Fast Reaction
  20. Coupled System
  21. Attractor for fast reaction
  22. Solving for the slow dynamics
  23. Comparison
  24. Next steps